MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Rothia nasimurium
19428wA5_irhom_31
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 127
bases: 2,688,339 bps
CDS: 2,489
rRNA: 6
Repeat region:
tmRNA: 1
tRNA: 55
misc RNA:
Total features: 2,551
Total number of protein coding genes annotated/found:
2,489
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Items 21 - 40
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5043|JADGLK010000010.1
SEQF5043_00041
Genome Viewer
NA
AA
672/224
37222-37893
hypothetical protein
SEQF5043|JADGLK010000010.1
SEQF5043_00042
Genome Viewer
NA
AA
1755/585
37962-39716
putative ABC transporter ATP-binding protein
SEQF5043|JADGLK010000010.1
SEQF5043_00043
Genome Viewer
NA
AA
1923/641
39713-41635
putative ABC transporter ATP-binding protein
SEQF5043|JADGLK010000010.1
SEQF5043_00044
Genome Viewer
NA
AA
219/73
42036-42254
hypothetical protein
SEQF5043|JADGLK010000010.1
SEQF5043_00045
Genome Viewer
NA
AA
1104/368
43354-42251
hypothetical protein
SEQF5043|JADGLK010000010.1
SEQF5043_00046
Genome Viewer
NA
AA
312/104
43649-43338
hypothetical protein
SEQF5043|JADGLK010000010.1
SEQF5043_00047
Genome Viewer
NA
AA
369/123
43943-44311
hypothetical protein
SEQF5043|JADGLK010000010.1
SEQF5043_00048
Genome Viewer
NA
AA
813/271
44260-45072
hypothetical protein
SEQF5043|JADGLK010000010.1
SEQF5043_00049
Genome Viewer
NA
AA
186/62
45069-45254
hypothetical protein
SEQF5043|JADGLK010000010.1
SEQF5043_00051
Genome Viewer
NA
AA
504/168
47260-46757
hypothetical protein
SEQF5043|JADGLK010000010.1
SEQF5043_00054
Genome Viewer
NA
AA
1248/416
50265-49018
hypothetical protein
SEQF5043|JADGLK010000010.1
SEQF5043_00055
Genome Viewer
NA
AA
1458/486
51726-50269
hypothetical protein
SEQF5043|JADGLK010000010.1
SEQF5043_00056
Genome Viewer
NA
AA
759/253
52584-51826
hypothetical protein
SEQF5043|JADGLK010000010.1
SEQF5043_00058
Genome Viewer
NA
AA
768/256
53849-54616
hypothetical protein
SEQF5043|JADGLK010000010.1
SEQF5043_00059
Genome Viewer
NA
AA
1170/390
54658-55827
hypothetical protein
SEQF5043|JADGLK010000010.1
SEQF5043_00060
Genome Viewer
NA
AA
900/300
56070-56969
hypothetical protein
SEQF5043|JADGLK010000010.1
SEQF5043_00065
Genome Viewer
NA
AA
984/328
63450-64433
hypothetical protein
SEQF5043|JADGLK010000011.1
SEQF5043_00069
Genome Viewer
NA
AA
531/177
1910-2440
hypothetical protein
SEQF5043|JADGLK010000011.1
SEQF5043_00073
Genome Viewer
NA
AA
315/105
8059-8373
hypothetical protein
SEQF5043|JADGLK010000011.1
SEQF5043_00082
Genome Viewer
NA
AA
909/303
19001-19909
DegV domain-containing protein
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Items 21 - 40
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JBrowse Genome Viewer
* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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